Tibeuleu/FOC_Reduction
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make use of new query to clean directory

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This commit is contained in:
Thibault Barnouin
2023-05-12 13:50:04 +02:00
parent 8b91290c54
commit c43c635615
200 changed files with 70 additions and 160 deletions
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10
src/FOC_reduction.py
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@@ -14,7 +14,7 @@ from lib.deconvolve import from_file_psf
from lib.query import retrieve_products
def main(target=None, proposal_id=None, infiles=None):
def main(target=None, proposal_id=None, infiles=None, output_dir="./data"):
## Reduction parameters
# Deconvolution
deconvolve = False
@@ -73,7 +73,7 @@ def main(target=None, proposal_id=None, infiles=None):
if target is None:
target = input("Target name:\n>")
else:
target, products = retrieve_products(target,proposal_id)
target, products = retrieve_products(target,proposal_id,output_dir=output_dir)
data_folder = products[0][0,0]
try:
plots_folder = data_folder.replace("data","plots")
@@ -83,7 +83,7 @@ def main(target=None, proposal_id=None, infiles=None):
data_array, headers = proj_fits.get_obs_data(infiles, data_folder=data_folder, compute_flux=True)
figname = "_".join([target,"FOC"])
figtype = "_".join(["".join([s[0] for s in smoothing_function.split("_")]),str(smoothing_FWHM).replace(".","")]) #additionnal informations
figtype = "_".join(["".join([s[0] for s in smoothing_function.split("_")]),"{0:.2f}".format(smoothing_FWHM).replace(".","")]) #additionnal informations
# Crop data to remove outside blank margins.
data_array, error_array, headers = proj_red.crop_array(data_array, headers, step=5, null_val=0., inside=True, display=display_crop, savename=figname, plots_folder=plots_folder)
@@ -185,6 +185,8 @@ if __name__ == "__main__":
help='the proposal id of the data products', type=int, default=None)
parser.add_argument('-f','--files', metavar='path', required=False, nargs='*',
help='the full or relative path to the data products', default=None)
parser.add_argument('-o','--output_dir', metavar='directory_path', required=False,
help='output directory path for the data products', type=str, default="./data")
args = parser.parse_args()
exitcode = main(target=args.target, proposal_id=args.proposal_id, infiles=args.files)
exitcode = main(target=args.target, proposal_id=args.proposal_id, infiles=args.files, output_dir=args.output_dir)
print("Finished with ExitCode: ",exitcode)