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a/plots/NGC1068_x274020/NGC1068_FOC_errors_background_location.png b/plots/NGC1068_x274020/NGC1068_FOC_errors_background_location.png deleted file mode 100644 index e6a05af..0000000 Binary files a/plots/NGC1068_x274020/NGC1068_FOC_errors_background_location.png and /dev/null differ diff --git a/src/FOC_reduction.py b/src/FOC_reduction.py index 6b060e7..4fb80a4 100755 --- a/src/FOC_reduction.py +++ b/src/FOC_reduction.py @@ -20,12 +20,12 @@ from astropy.wcs import WCS def main(): ##### User inputs ## Input and output locations - globals()['data_folder'] = "../data/NGC1068_x274020/" - infiles = ['x274020at.c0f.fits','x274020bt.c0f.fits','x274020ct.c0f.fits', - 'x274020dt.c0f.fits','x274020et.c0f.fits','x274020ft.c0f.fits', - 'x274020gt.c0f.fits','x274020ht.c0f.fits','x274020it.c0f.fits'] +# globals()['data_folder'] = "../data/NGC1068_x274020/" +# infiles = ['x274020at_c0f.fits','x274020bt_c0f.fits','x274020ct_c0f.fits', +# 'x274020dt_c0f.fits','x274020et_c0f.fits','x274020ft_c0f.fits', +# 'x274020gt_c0f.fits','x274020ht_c0f.fits','x274020it_c0f.fits'] # psf_file = 'NGC1068_f253m00.fits' - globals()['plots_folder'] = "../plots/NGC1068_x274020/" +# globals()['plots_folder'] = "../plots/NGC1068_x274020/" # globals()['data_folder'] = "../data/IC5063_x3nl030/" # infiles = ['x3nl0301r_c0f.fits','x3nl0302r_c0f.fits','x3nl0303r_c0f.fits'] @@ -86,6 +86,24 @@ def main(): # infiles = ['x0u20101t_c0f.fits','x0u20102t_c0f.fits','x0u20103t_c0f.fits','x0u20104t_c0f.fits','x0u20105t_c0f.fits','x0u20106t_c0f.fits','x0u20201t_c0f.fits','x0u20202t_c0f.fits','x0u20203t_c0f.fits','x0u20204t_c0f.fits','x0u20205t_c0f.fits','x0u20206t_c0f.fits','x0u20301t_c0f.fits','x0u20302t_c0f.fits','x0u20303t_c0f.fits','x0u20304t_c0f.fits','x0u20305t_c0f.fits','x0u20306t_c0f.fits'] # globals()['plots_folder'] = "../plots/3C273_x0u20/" +#BEWARE: 5 observations separated by 1 year each (1995, 1996, 1997, 1998, 1999) + globals()['data_folder'] = "../data/M87/POS1/" + infiles = ['x2py010ct_c0f.fits','x2py010dt_c0f.fits','x2py010et_c0f.fits','x2py010ft_c0f.fits'] #1995 +# infiles = ['x3be010ct_c0f.fits','x3be010dt_c0f.fits','x3be010et_c0f.fits','x3be010ft_c0f.fits'] #1996 +# infiles = ['x43r010km_c0f.fits','x43r010mm_c0f.fits','x43r010om_c0f.fits','x43r010rm_c0f.fits'] #1997 +# infiles = ['x43r110kr_c0f.fits','x43r110mr_c0f.fits','x43r110or_c0f.fits','x43r110rr_c0f.fits'] #1998 +# infiles = ['x43r210kr_c0f.fits','x43r210mr_c0f.fits','x43r210or_c0f.fits','x43r210rr_c0f.fits'] #1999 + globals()['plots_folder'] = "../plots/M87/POS1/" + +#BEWARE: 5 observations separated by 1 year each (1995, 1996, 1997, 1998, 1999) +# globals()['data_folder'] = "../data/M87/POS3/" +# infiles = ['x2py030at_c0f.fits','x2py030bt_c0f.fits','x2py030ct_c0f.fits','x2py0309t_c0f.fits'] #1995 +# infiles = ['x3be030at_c0f.fits','x3be030bt_c0f.fits','x3be030ct_c0f.fits','x3be0309t_c0f.fits'] #1996 +# infiles = ['x43r030em_c0f.fits','x43r030gm_c0f.fits','x43r030im_c0f.fits','x43r030lm_c0f.fits'] #1997 +# infiles = ['x43r130er_c0f.fits','x43r130fr_c0f.fits','x43r130ir_c0f.fits','x43r130lr_c0f.fits'] #1998 +# infiles = ['x43r230er_c0f.fits','x43r230fr_c0f.fits','x43r230ir_c0f.fits','x43r230lr_c0f.fits'] #1999 +# globals()['plots_folder'] = "../plots/M87/POS3/" + ## Reduction parameters # Deconvolution deconvolve = False @@ -105,7 +123,7 @@ def main(): # Data binning rebin = True if rebin: - pxsize = 0.05 + pxsize = 0.1 px_scale = 'arcsec' #pixel, arcsec or full rebin_operation = 'sum' #sum or average # Alignement @@ -122,11 +140,11 @@ def main(): crop = False #Crop to desired ROI final_display = True # Polarization map output - figname = 'NGC1068_FOC' #target/intrument name - figtype = '_combine_FWHM010' #additionnal informations - SNRp_cut = 5. #P measurments with SNR>3 - SNRi_cut = 50. #I measurments with SNR>30, which implies an uncertainty in P of 4.7%. - step_vec = 1 #plot all vectors in the array. if step_vec = 2, then every other vector will be plotted + figname = 'M87_POS1_1995_FOC' #target/intrument name + figtype = '_combine_FWHM01' #additionnal informations + SNRp_cut = 3. #P measurments with SNR>3 + SNRi_cut = 30. #I measurments with SNR>30, which implies an uncertainty in P of 4.7%. + step_vec = 0 #plot all vectors in the array. if step_vec = 2, then every other vector will be plotted # if step_vec = 0 then all vectors are displayed at full length ##### Pipeline start diff --git a/src/run_pipeline b/src/run_pipeline new file mode 100644 index 0000000..6c943bf --- /dev/null +++ b/src/run_pipeline @@ -0,0 +1,8 @@ +EXECUTER PIPELINE +python3 FOC_reduction.py + +OUVRIR LE FICHIER FITS FINAL AVEC L'OUTIL D'ANALYSE +python3 analysis.py -f ../data/NGC1068_x274020/NGC1068_FOC_combine_FWHM010.fits + +METTRE DES VALEURS PAR DEFAUT A L'OUTIL D'ANALYSE POUR LES CUTS EN POLARIZATION ET INTENSITE +python3 analysis.py -f ../data/NGC1068_x274020/NGC1068_FOC_combine_FWHM010.fits -p 5 -i 10 diff --git a/update_git b/update_git new file mode 100644 index 0000000..7b3950d --- /dev/null +++ b/update_git @@ -0,0 +1,14 @@ +RECUPERER NOUVELLE VERSION +git fetch + +INSTALLER NOUVELLE VERSION +git pull origin main + +AJOUTER TOUS LES FICHIERS A L'ARBRE DE DIFFERENTIATION DU GIT +git add . + +PRENDRE TOUS LES FICHIERS DE L'ARBRE COURANT POUR EN FAIRE UNE VERSION +git commit -m "mesage du commit" + +ENVOYER MES COMMITS LOCAUX AU DOSSIER PARTAGE DISTANT +git push -u origin main