Tibeuleu/FOC_Reduction
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Marin
2022-07-08 14:13:49 +02:00
parent fc38b24b0d
commit ac25959445
2 changed files with 37 additions and 11 deletions
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40
src/FOC_reduction.py
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@@ -20,12 +20,12 @@ from astropy.wcs import WCS
def main(): def main():
##### User inputs ##### User inputs
## Input and output locations ## Input and output locations
globals()['data_folder'] = "../data/NGC1068_x274020/" # globals()['data_folder'] = "../data/NGC1068_x274020/"
infiles = ['x274020at.c0f.fits','x274020bt.c0f.fits','x274020ct.c0f.fits', # infiles = ['x274020at_c0f.fits','x274020bt_c0f.fits','x274020ct_c0f.fits',
'x274020dt.c0f.fits','x274020et.c0f.fits','x274020ft.c0f.fits', # 'x274020dt_c0f.fits','x274020et_c0f.fits','x274020ft_c0f.fits',
'x274020gt.c0f.fits','x274020ht.c0f.fits','x274020it.c0f.fits'] # 'x274020gt_c0f.fits','x274020ht_c0f.fits','x274020it_c0f.fits']
# psf_file = 'NGC1068_f253m00.fits' # psf_file = 'NGC1068_f253m00.fits'
globals()['plots_folder'] = "../plots/NGC1068_x274020/" # globals()['plots_folder'] = "../plots/NGC1068_x274020/"
# globals()['data_folder'] = "../data/IC5063_x3nl030/" # globals()['data_folder'] = "../data/IC5063_x3nl030/"
# infiles = ['x3nl0301r_c0f.fits','x3nl0302r_c0f.fits','x3nl0303r_c0f.fits'] # infiles = ['x3nl0301r_c0f.fits','x3nl0302r_c0f.fits','x3nl0303r_c0f.fits']
@@ -86,6 +86,24 @@ def main():
# infiles = ['x0u20101t_c0f.fits','x0u20102t_c0f.fits','x0u20103t_c0f.fits','x0u20104t_c0f.fits','x0u20105t_c0f.fits','x0u20106t_c0f.fits','x0u20201t_c0f.fits','x0u20202t_c0f.fits','x0u20203t_c0f.fits','x0u20204t_c0f.fits','x0u20205t_c0f.fits','x0u20206t_c0f.fits','x0u20301t_c0f.fits','x0u20302t_c0f.fits','x0u20303t_c0f.fits','x0u20304t_c0f.fits','x0u20305t_c0f.fits','x0u20306t_c0f.fits'] # infiles = ['x0u20101t_c0f.fits','x0u20102t_c0f.fits','x0u20103t_c0f.fits','x0u20104t_c0f.fits','x0u20105t_c0f.fits','x0u20106t_c0f.fits','x0u20201t_c0f.fits','x0u20202t_c0f.fits','x0u20203t_c0f.fits','x0u20204t_c0f.fits','x0u20205t_c0f.fits','x0u20206t_c0f.fits','x0u20301t_c0f.fits','x0u20302t_c0f.fits','x0u20303t_c0f.fits','x0u20304t_c0f.fits','x0u20305t_c0f.fits','x0u20306t_c0f.fits']
# globals()['plots_folder'] = "../plots/3C273_x0u20/" # globals()['plots_folder'] = "../plots/3C273_x0u20/"
#BEWARE: 5 observations separated by 1 year each (1995, 1996, 1997, 1998, 1999)
globals()['data_folder'] = "../data/M87/POS1/"
infiles = ['x2py010ct_c0f.fits','x2py010dt_c0f.fits','x2py010et_c0f.fits','x2py010ft_c0f.fits'] #1995
# infiles = ['x3be010ct_c0f.fits','x3be010dt_c0f.fits','x3be010et_c0f.fits','x3be010ft_c0f.fits'] #1996
# infiles = ['x43r010km_c0f.fits','x43r010mm_c0f.fits','x43r010om_c0f.fits','x43r010rm_c0f.fits'] #1997
# infiles = ['x43r110kr_c0f.fits','x43r110mr_c0f.fits','x43r110or_c0f.fits','x43r110rr_c0f.fits'] #1998
# infiles = ['x43r210kr_c0f.fits','x43r210mr_c0f.fits','x43r210or_c0f.fits','x43r210rr_c0f.fits'] #1999
globals()['plots_folder'] = "../plots/M87/POS1/"
#BEWARE: 5 observations separated by 1 year each (1995, 1996, 1997, 1998, 1999)
# globals()['data_folder'] = "../data/M87/POS3/"
# infiles = ['x2py030at_c0f.fits','x2py030bt_c0f.fits','x2py030ct_c0f.fits','x2py0309t_c0f.fits'] #1995
# infiles = ['x3be030at_c0f.fits','x3be030bt_c0f.fits','x3be030ct_c0f.fits','x3be0309t_c0f.fits'] #1996
# infiles = ['x43r030em_c0f.fits','x43r030gm_c0f.fits','x43r030im_c0f.fits','x43r030lm_c0f.fits'] #1997
# infiles = ['x43r130er_c0f.fits','x43r130fr_c0f.fits','x43r130ir_c0f.fits','x43r130lr_c0f.fits'] #1998
# infiles = ['x43r230er_c0f.fits','x43r230fr_c0f.fits','x43r230ir_c0f.fits','x43r230lr_c0f.fits'] #1999
# globals()['plots_folder'] = "../plots/M87/POS3/"
## Reduction parameters ## Reduction parameters
# Deconvolution # Deconvolution
deconvolve = False deconvolve = False
@@ -105,7 +123,7 @@ def main():
# Data binning # Data binning
rebin = True rebin = True
if rebin: if rebin:
pxsize = 0.05 pxsize = 0.1
px_scale = 'arcsec' #pixel, arcsec or full px_scale = 'arcsec' #pixel, arcsec or full
rebin_operation = 'sum' #sum or average rebin_operation = 'sum' #sum or average
# Alignement # Alignement
@@ -122,11 +140,11 @@ def main():
crop = False #Crop to desired ROI crop = False #Crop to desired ROI
final_display = True final_display = True
# Polarization map output # Polarization map output
figname = 'NGC1068_FOC' #target/intrument name figname = 'M87_POS1_1995_FOC' #target/intrument name
figtype = '_combine_FWHM010' #additionnal informations figtype = '_combine_FWHM01' #additionnal informations
SNRp_cut = 5. #P measurments with SNR>3 SNRp_cut = 3. #P measurments with SNR>3
SNRi_cut = 50. #I measurments with SNR>30, which implies an uncertainty in P of 4.7%. SNRi_cut = 30. #I measurments with SNR>30, which implies an uncertainty in P of 4.7%.
step_vec = 1 #plot all vectors in the array. if step_vec = 2, then every other vector will be plotted step_vec = 0 #plot all vectors in the array. if step_vec = 2, then every other vector will be plotted
# if step_vec = 0 then all vectors are displayed at full length # if step_vec = 0 then all vectors are displayed at full length
##### Pipeline start ##### Pipeline start

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src/run_pipeline Normal file
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@@ -0,0 +1,8 @@
EXECUTER PIPELINE
python3 FOC_reduction.py
OUVRIR LE FICHIER FITS FINAL AVEC L'OUTIL D'ANALYSE
python3 analysis.py -f ../data/NGC1068_x274020/NGC1068_FOC_combine_FWHM010.fits
METTRE DES VALEURS PAR DEFAUT A L'OUTIL D'ANALYSE POUR LES CUTS EN POLARIZATION ET INTENSITE
python3 analysis.py -f ../data/NGC1068_x274020/NGC1068_FOC_combine_FWHM010.fits -p 5 -i 10