Tibeuleu/FOC_Reduction
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some plot fix

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This commit is contained in:
Thibault Barnouin
2024-07-11 15:11:57 +02:00
parent 91a59f9664
commit 72a6938437
2 changed files with 19 additions and 16 deletions
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6
package/FOC_reduction.py
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@@ -36,7 +36,7 @@ def main(target=None, proposal_id=None, infiles=None, output_dir="./data", crop=
# Background estimation
error_sub_type = "freedman-diaconis" # sqrt, sturges, rice, scott, freedman-diaconis (default) or shape (example (51, 51))
subtract_error = 1.0
subtract_error = 2.0
display_bkg = False
# Data binning
@@ -54,7 +54,7 @@ def main(target=None, proposal_id=None, infiles=None, output_dir="./data", crop=
# Smoothing
smoothing_function = "combine" # gaussian_after, weighted_gaussian_after, gaussian, weighted_gaussian or combine
smoothing_FWHM = 2.0 # If None, no smoothing is done
smoothing_FWHM = 1.50 # If None, no smoothing is done
smoothing_scale = "px" # pixel or arcsec
# Rotation
@@ -401,7 +401,7 @@ def main(target=None, proposal_id=None, infiles=None, output_dir="./data", crop=
deepcopy(Stokes_hdul), data_mask, SNRp_cut=SNRp_cut, SNRi_cut=SNRi_cut, savename=figname, plots_folder=plots_folder, display="integrate"
)
elif pxscale.lower() not in ["full", "integrate"]:
proj_plots.pol_map(Stokes_hdul, SNRp_cut=SNRp_cut, SNRi_cut=SNRi_cut, flux_lim=flux_lim)
proj_plots.pol_map(Stokes_hdul, SNRp_cut=SNRp_cut, SNRi_cut=SNRi_cut, step_vec=step_vec, scale_vec=scale_vec, flux_lim=flux_lim)
return outfiles

27
package/lib/plots.py
View File

@@ -326,7 +326,7 @@ def polarization_map(
plt.rcdefaults()
ratiox = max(int(stkI.shape[1]/(stkI.shape[0])),1)
ratioy = max(int((stkI.shape[0])/stkI.shape[1]),1)
fig, ax = plt.subplots(figsize=(6*ratiox, 6*ratioy), layout="compressed", subplot_kw=dict(projection=wcs))
fig, ax = plt.subplots(figsize=(7*ratiox, 7*ratioy), layout="compressed", subplot_kw=dict(projection=wcs))
ax.set(aspect="equal", fc="k", ylim=[-stkI.shape[0]*0.10,stkI.shape[0]*1.15])
# fig.subplots_adjust(hspace=0, wspace=0, left=0.102, right=1.02)
@@ -449,8 +449,8 @@ def polarization_map(
ax.transAxes,
"E",
"N",
length=-0.05,
fontsize=0.02,
length=-0.07,
fontsize=0.03,
loc=1,
aspect_ratio=-(stkI.shape[1]/(stkI.shape[0]*1.25)),
sep_y=0.01,
@@ -670,7 +670,7 @@ class align_maps(object):
length=-0.08,
fontsize=0.03,
loc=1,
aspect_ratio=-(self.map_data.shape[1]/self.map_data.shape[0]),
aspect_ratio=-(self.map_ax.get_xbound()[1]-self.map_ax.get_xbound()[0])/(self.map_ax.get_ybound()[1]-self.map_ax.get_ybound()[0]),
sep_y=0.01,
sep_x=0.01,
angle=-self.map_header["orientat"],
@@ -722,13 +722,13 @@ class align_maps(object):
)
if "ORIENTAT" in list(self.other_header.keys()):
north_dir2 = AnchoredDirectionArrows(
self.map_ax.transAxes,
self.other_ax.transAxes,
"E",
"N",
length=-0.08,
fontsize=0.03,
loc=1,
aspect_ratio=-(self.other_data.shape[1]/self.other_data.shape[0]),
aspect_ratio=-(self.other_ax.get_xbound()[1]-self.other_ax.get_xbound()[0])/(self.other_ax.get_ybound()[1]-self.other_ax.get_ybound()[0]),
sep_y=0.01,
sep_x=0.01,
angle=-self.other_header["orientat"],
@@ -1272,7 +1272,9 @@ class overplot_pol(align_maps):
pol[SNRi < SNRi_cut] = np.nan
plt.rcParams.update({"font.size": 16})
self.fig_overplot, self.ax_overplot = plt.subplots(figsize=(11, 10), subplot_kw=dict(projection=self.other_wcs))
ratiox = max(int(stkI.shape[1]/stkI.shape[0]),1)
ratioy = max(int(stkI.shape[0]/stkI.shape[1]),1)
self.fig_overplot, self.ax_overplot = plt.subplots(figsize=(10*ratiox, 10*ratioy), subplot_kw=dict(projection=self.other_wcs))
self.fig_overplot.subplots_adjust(hspace=0, wspace=0, bottom=0.1, left=0.1, top=0.80, right=1.02)
self.ax_overplot.set_xlabel(label="Right Ascension (J2000)")
@@ -1327,11 +1329,12 @@ class overplot_pol(align_maps):
)
# Display full size polarization vectors
px_scale = self.wcs_UV.wcs.get_cdelt()[0]/self.other_wcs.wcs.get_cdelt()[0]
if scale_vec is None:
self.scale_vec = 2.0
self.scale_vec = 2.0*px_scale
pol[np.isfinite(pol)] = 1.0 / 2.0
else:
self.scale_vec = scale_vec
self.scale_vec = scale_vec*px_scale
step_vec = 1
self.X, self.Y = np.meshgrid(np.arange(stkI.shape[1]), np.arange(stkI.shape[0]))
self.U, self.V = pol * np.cos(np.pi / 2.0 + pang * np.pi / 180.0), pol * np.sin(np.pi / 2.0 + pang * np.pi / 180.0)
@@ -1348,8 +1351,8 @@ class overplot_pol(align_maps):
headwidth=0.0,
headlength=0.0,
headaxislength=0.0,
width=0.5,
linewidth=0.75,
width=0.5*px_scale,
linewidth=0.3*px_scale,
color="white",
edgecolor="black",
transform=self.ax_overplot.get_transform(self.wcs_UV),
@@ -1388,7 +1391,7 @@ class overplot_pol(align_maps):
length=-0.08,
fontsize=0.03,
loc=1,
aspect_ratio=-(stkI.shape[1]/stkI.shape[0]),
aspect_ratio=-(self.ax_overplot.get_xbound()[1]-self.ax_overplot.get_xbound()[0])/(self.ax_overplot.get_ybound()[1]-self.ax_overplot.get_ybound()[0]),
sep_y=0.01,
sep_x=0.01,
angle=-self.Stokes_UV[0].header["orientat"],