Tibeuleu/FOC_Reduction
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reduce NGC1068 for comparison with Kishimoto's pipeline

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Tibeuleu
2022-10-19 16:22:09 +02:00
parent d3c11eb4af
commit 3e315783f2
14 changed files with 37 additions and 29 deletions
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src/FOC_reduction.py
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@@ -18,12 +18,13 @@ from astropy.wcs import WCS
##### User inputs
## Input and output locations
#globals()['data_folder'] = "../data/NGC1068_x274020/"
#globals()['infiles'] = ['x274020at_c0f.fits','x274020bt_c0f.fits','x274020ct_c0f.fits',
# 'x274020dt_c0f.fits','x274020et_c0f.fits','x274020ft_c0f.fits',
# 'x274020gt_c0f.fits','x274020ht_c0f.fits','x274020it_c0f.fits']
##psf_file = 'NGC1068_f253m00.fits'
#globals()['plots_folder'] = "../plots/NGC1068_x274020/"
globals()['data_folder'] = "../data/NGC1068_x274020/"
#globals()['infiles'] = ['xn1c400.fits','xn2c400.fits','xn3c400.fits']
globals()['infiles'] = ['x274020at_c0f.fits','x274020bt_c0f.fits','x274020ct_c0f.fits',
'x274020dt_c0f.fits','x274020et_c0f.fits','x274020ft_c0f.fits',
'x274020gt_c0f.fits','x274020ht_c0f.fits','x274020it_c0f.fits']
#psf_file = 'NGC1068_f253m00.fits'
globals()['plots_folder'] = "../plots/NGC1068_x274020/"
#globals()['data_folder'] = "../data/IC5063_x3nl030/"
#globals()['infiles'] = ['x3nl0301r_c0f.fits','x3nl0302r_c0f.fits','x3nl0303r_c0f.fits']
@@ -90,13 +91,13 @@ from astropy.wcs import WCS
#globals()['plots_folder'] = "../plots/3C273_x0u20/"
#BEWARE: 5 observations separated by 1 year each (1995, 1996, 1997, 1998, 1999)
globals()['data_folder'] = "../data/M87/POS1/"
#globals()['data_folder'] = "../data/M87/POS1/"
#globals()['infiles'] = ['x2py010ct_c0f.fits','x2py010dt_c0f.fits','x2py010et_c0f.fits','x2py010ft_c0f.fits'] #1995
#globals()['infiles'] = ['x3be010ct_c0f.fits','x3be010dt_c0f.fits','x3be010et_c0f.fits','x3be010ft_c0f.fits'] #1996
#globals()['infiles'] = ['x43r010km_c0f.fits','x43r010mm_c0f.fits','x43r010om_c0f.fits','x43r010rm_c0f.fits'] #1997
#globals()['infiles'] = ['x43r110kr_c0f.fits','x43r110mr_c0f.fits','x43r110or_c0f.fits','x43r110rr_c0f.fits'] #1998
globals()['infiles'] = ['x43r210kr_c0f.fits','x43r210mr_c0f.fits','x43r210or_c0f.fits','x43r210rr_c0f.fits'] #1999
globals()['plots_folder'] = "../plots/M87/POS1/"
#globals()['infiles'] = ['x43r210kr_c0f.fits','x43r210mr_c0f.fits','x43r210or_c0f.fits','x43r210rr_c0f.fits'] #1999
#globals()['plots_folder'] = "../plots/M87/POS1/"
#BEWARE: 5 observations separated by 1 year each (1995, 1996, 1997, 1998, 1999)
#globals()['data_folder'] = "../data/M87/POS3/"
@@ -128,28 +129,28 @@ def main():
# Data binning
rebin = True
if rebin:
pxsize = 0.05
px_scale = 'arcsec' #pixel, arcsec or full
pxsize = 10
px_scale = 'pixel' #pixel, arcsec or full
rebin_operation = 'sum' #sum or average
# Alignement
align_center = 'image' #If None will align image to image center
display_data = False
# Smoothing
smoothing_function = 'combine' #gaussian_after, weighted_gaussian_after, gaussian, weighted_gaussian or combine
smoothing_FWHM = 0.10 #If None, no smoothing is done
smoothing_FWHM = None #If None, no smoothing is done
smoothing_scale = 'arcsec' #pixel or arcsec
# Rotation
rotate_stokes = True #rotation to North convention can give erroneous results
rotate_data = False #rotation to North convention can give erroneous results
# Final crop
crop = False #Crop to desired ROI
final_display = True
final_display = False
# Polarization map output
figname = 'M87_POS1_1999_FOC' #target/intrument name
figtype = '_combine_FWHM010' #additionnal informations
figname = 'NGC1068_K_FOC' #target/intrument name
figtype = '_bin10px' #additionnal informations
SNRp_cut = 3. #P measurments with SNR>3
SNRi_cut = 30. #I measurments with SNR>30, which implies an uncertainty in P of 4.7%.
step_vec = 0 #plot all vectors in the array. if step_vec = 2, then every other vector will be plotted
step_vec = 1 #plot all vectors in the array. if step_vec = 2, then every other vector will be plotted
# if step_vec = 0 then all vectors are displayed at full length
##### Pipeline start