Tibeuleu/FOC_Reduction
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change terminal interaction

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Thibault Barnouin
2024-03-13 12:27:26 +01:00
parent 762b857720
commit 1cadaffce6
1 changed files with 6 additions and 11 deletions
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src/FOC_reduction.py
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@@ -14,7 +14,7 @@ from lib.query import retrieve_products, path_exists, system
from matplotlib.colors import LogNorm from matplotlib.colors import LogNorm
def main(target=None, proposal_id=None, infiles=None, output_dir="./data", crop=0, interactive=0): def main(target=None, proposal_id=None, infiles=None, output_dir="./data", crop=False, interactive=False):
# Reduction parameters # Reduction parameters
# Deconvolution # Deconvolution
deconvolve = False deconvolve = False
@@ -22,9 +22,9 @@ def main(target=None, proposal_id=None, infiles=None, output_dir="./data", crop=
# from lib.deconvolve import from_file_psf # from lib.deconvolve import from_file_psf
psf = 'gaussian' # Can be user-defined as well psf = 'gaussian' # Can be user-defined as well
# psf = from_file_psf(data_folder+psf_file) # psf = from_file_psf(data_folder+psf_file)
psf_FWHM = 0.015 psf_FWHM = 0.028
psf_scale = 'arcsec' psf_scale = 'arcsec'
psf_shape = (11, 11) psf_shape = (513, 513)
iterations = 3 iterations = 3
algo = "richardson" algo = "richardson"
@@ -49,17 +49,13 @@ def main(target=None, proposal_id=None, infiles=None, output_dir="./data", crop=
# Smoothing # Smoothing
smoothing_function = 'combine' # gaussian_after, weighted_gaussian_after, gaussian, weighted_gaussian or combine smoothing_function = 'combine' # gaussian_after, weighted_gaussian_after, gaussian, weighted_gaussian or combine
smoothing_FWHM = 0.10 # If None, no smoothing is done smoothing_FWHM = 0.10 # If None, no smoothing is done
smoothing_scale = 'arcsec' # pixel or arcsec smoothing_scale = 'arcsec' # pixel or arcsec
# Rotation # Rotation
rotate_data = False # rotation to North convention can give erroneous results rotate_data = False # rotation to North convention can give erroneous results
rotate_stokes = True rotate_stokes = True
# Final crop
crop = True # Crop to desired ROI
interactive = True # Whether to output to intercative analysis tool
# Polarization map output # Polarization map output
SNRp_cut = 3. # P measurments with SNR>3 SNRp_cut = 3. # P measurments with SNR>3
SNRi_cut = 30. # I measurments with SNR>30, which implies an uncertainty in P of 4.7%. SNRi_cut = 30. # I measurments with SNR>30, which implies an uncertainty in P of 4.7%.
@@ -231,9 +227,8 @@ if __name__ == "__main__":
parser.add_argument('-f', '--files', metavar='path', required=False, nargs='*', help='the full or relative path to the data products', default=None) parser.add_argument('-f', '--files', metavar='path', required=False, nargs='*', help='the full or relative path to the data products', default=None)
parser.add_argument('-o', '--output_dir', metavar='directory_path', required=False, parser.add_argument('-o', '--output_dir', metavar='directory_path', required=False,
help='output directory path for the data products', type=str, default="./data") help='output directory path for the data products', type=str, default="./data")
parser.add_argument('-c', '--crop', metavar='crop_boolean', required=False, help='whether to crop the analysis region', type=int, default=0) parser.add_argument('-c', '--crop', required=False, help='whether to crop the analysis region', default=False, action='store_true')
parser.add_argument('-i', '--interactive', metavar='interactive_boolean', required=False, parser.add_argument('-i', '--interactive', required=False, help='whether to output to the interactive analysis tool', default=False, action='store_true')
help='whether to output to the interactive analysis tool', type=int, default=0)
args = parser.parse_args() args = parser.parse_args()
exitcode = main(target=args.target, proposal_id=args.proposal_id, infiles=args.files, exitcode = main(target=args.target, proposal_id=args.proposal_id, infiles=args.files,
output_dir=args.output_dir, crop=args.crop, interactive=args.interactive) output_dir=args.output_dir, crop=args.crop, interactive=args.interactive)